Malika', a hard red spring wheat (Triticum aestivum L.) cultivar developed using doubled haploid technology by the Institut National de la Recherche Agronomique (INRA), Morocco, and tested as 06DHBW48, was approved for release in 2016 by the Office National de S?curit? Sanitaire des Produits Alimentaires (ONSSA), Morocco. Malika was selected from the doubled haploids derived from the cross 'Achtar3*//'Kanz'/Ks85-8-4). Achtar and Kanz are Moroccan varieties originating from segregating populations from CIMMYT. Achtar and Kanz are a well adapted to Moroccan conditions but susceptible to the Hessian fly, yellow rusts and some races of leaf rust. 'Achtar' was crossed with it in order to incorporate the Hessian fly resistance, yellow rust resistance and leaf rust resistance and 'Achtar' was crossed with Kanz/Ks85-8-4 having resistance to Hessian fly, yellow rust and leaf rust. Backcrossed 3 times with 'Achtar', and selected lines having resistance to the Hessian fly, yellow rust and leaf rust from the population derived from each backcross. Finally the selected the resistant line was used develop doubled haploids. The doubled haploid lines produced were tested in the laboratory and field for Hessian fly and the rust resistance. The resistant lines were incorporated in the multi-local yield trials and three promising lines with the resistance to Hessian fly, yellow rust and leaf rust and better yield and quality were submitted for registration in the official catalog in 2014. After 2 years of testing (years 2014-15 and 2015-16), one line (06DHBW48) was accepted for the registration and designated as 'Malika'. 'Malika' is a semi-dwarf variety, well adapted to semi-arid regions, early maturing, high yielding, tolerant to drought and resistant to Hessian fly, leaf rust and yellow rust.
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The Lr34/Yr18/Sr57/Pm38/Ltn1 multi-resistance locus has been deployed and remained effective in wheat cultivars for more than 100 years. The durability and pleiotropic nature makes Lr34 a unique and highly valuable resource for rust resistance breeding. Despite its functional annotation as an ABC transporter, the mode of action is unknown. Considering this, we aimed to decipher molecular factors and signaling components essential for Lr34 function using RNA-seq of Chara resistant (Lr34) and Chara mutant (heavy ion irradiation, HII) susceptible wheat lines. Screening of Chara and Chara HII lines with Lr34-specific markers confirmed the integrity of Lr34 in both lines; however, phenotyping confirmed rust and powdery mildew susceptibility in the Chara HII lines. Plants were grown under controlled conditions and infected with Puccinia triticina pathotype 76-1,3,5,7,9,10,12,13+Lr37 at the flag leaf stage. Flag leaves were sampled at 0, 24, 48, 72, 96 and 168 hours post inoculation (hpi) from mock and infected plants. Based on real-time PCR analysis of basal defense genes and the Lr34 gene, we selected 72 hpi for RNA-seq with four biological replicates per condition. The samples were sequenced on an Illumina Hiseq 4000 at the Beijing Genomics Institute, China. A total of 9.0 Gb of sequence (2.25 Gb/library) from 16 libraries for four conditions was obtained. Differential expression analysis was performed using the Tuxedo analysis pipeline with standard parameters. Analysis revealed deletion of DNA fragments with collinear gene order on chromosomes 1A, 2D, 5A, 5B, 5D and 7D of Chara HII mutants. To determine the significance of the deletions we performed bulk segregant analyses on segregating F2 populations of Chara ? Chara HII crosses. Analyses revealed key genomic regions associated with Lr34-functional resistance and we are in the process of validating candidate genes using qPCR.
A total of 41 bread wheat (Triticum aestivum L.) varieties have been released so far in Nepal since 1960. Farmers have been gradually adopting newly released varieties due to disease and lodging resistance, better yield performance and good taste. In Nepal, wheat area coverage, production and productivity have been increased by almost seven, sixteen and two folds, respectively in the last 56 years. Performance of varieties varies from one region to another. Yellow rust is the major problems in hills while leaf rust is the primary issue on the plains. Stem rust is sporadic in localized areas of Nepal. Wheat research program in Nepal has released 9 wheat varieties resistant to Ug99 namely Vijaya, Tilottama, Banganga, Gaura, Dhaulagiri, Danphe, Sworgadwari, Munal and Chyakhura. Vijay, Tilottama and Banganga are also resistant to leaf rust while, Dhaulagiri, Danphe, Sworgadwari, Munal and Chyakhura are resistant to yellow rust. Since the release of Vijay, the first Ug99 resistant variety in Nepal during 2010, source seed production of rust resistant varieties has been increasing significantly each year with present coverage under these varieties being around 40%. WK 1204 has been occupied 35% area in hills of Nepal. Seed production and distribution of such high yielding disease resistant varieties through public-private partnership is leading to quality seed supply for varietal diversity and better food security in the country.
Wheat varieties with single effective gene for leaf rust resistance often quickly become susceptible because of multiplication of virulent Puccinia triticina genotypes. One of the methods to elongate term of effectiveness is to combine two genes in host genotype. To note, it is impossible to distinguish phenotypically plants or families having one or two genes in hybrid populations; the only method is to use PCR producing DNA markers linked to each gene for resistance. It is not convenient when necessary to analyze thousands plants or especially families of crosses between carriers of certain genes. At inoculation of wheat seedlings having Lr 9, 19, 24, 47, 29 and Sp with rust population from North-West region of Russian Federation all of them were absolutely resistant, so these genes may be considered to be effective in this region. Rust population was multiplied on cv. Leningradka leaf segments placed on cotton wool wetted with solution of maleic acid hidrazide (10 mg/l) + potassium chloride (0.48 g/l) +monosubstituted sodium phosphate (0.66 g/l) and used to infect seedling of the lines constantly poured with the solution. Rare pustules were recorded on each line. Isolates from the line were combined, multiplied and used to infect the lines set. Interaction specificity was shown for carriers of certain genes for resistance and inoculums. We propose to infect seedlings of hybrid wheat populations with mixtures of isolates virulent to first gene and those virulent to second one at use of above-mentioned method to multiply rust and grow plants. Seedlings resistant to that inoculum have both genes for resistance. If we have F3 or later families it is possible to use original population without selection of virulent isolates; in this case the method allowed removing progenies of heterozygous plants. With this approach we developed lines possessing combinations of Lr9+Lr24 and Lr9+Lr47 genes
Stem and leaf rusts affect the winter and spring wheat in the Novosibirsk region. During 2008-2017 leaf rust incidence was generally moderate, from 20 to 40%. A leaf rust outbreak occurred in 2015 when incidence increased up to 80%. Leaf rust severity on the 'Thatcher' NILs ranged from immune or resistant to highly susceptible host response with maximum severity of 90S. Lines carrying genes Lr17, Lr18, Lr24, Lr29, Lr35, Lr37, Lr44, and LrW remained almost free of infection for the whole time of inspection. Genes Lr12, Lr13, Lr28, Lr34, and Lr38 exhibited moderate resistance but they did not provide sufficient level of resistance in favorable conditions. Since race-specific genes Lr24 and Lr29 are still effective in the neighboring Novosibirsk and Omsk regions, they might be recommended for breeding purposes in Western Siberia.
In 2016 stem rust was more prevalent and widespread in the region than ever before. Disease incidence ranged between 4.5 - 60% with high severity up to 80S in six fields from seven observed locations. The 4th ISRTN and varieties carrying Sr31 of West Siberian germplasm were assessed in field trials to monitor the virulence of the local population. There was no virulence to Sr9b, Sr9e, Sr20, Sr28, Sr29, Sr33, Sr39, Sr40, SrWld, Sr2 complex. Possible virulence to Sr6, Sr11, Sr12, Sr13, Sr17, Sr24, Sr25, Sr30, Sr31, Sr35, Sr38, Sr44, Sr57 was observed with low frequency. Entries genotyped for gene Sr31 were scored as MS and S. However, follow up race analysis work is needed to determine the actual stem rust races present and confirm the suspected possible observed virulence on Sr31.
Different biotic and abiotic stresses are hampering wheat yield across different geographic regions. Among biotic stresses, wheat rusts are principal cause of yield reduction. Whereas among abiotic stresses, drought is the principle cause of reduction in growth and lowering yield potential. So developing rust resistance and drought tolerance in wheat germplasm is needed, which requires assessment of genetic potential of current cultivars against these stresses to identify variation among existing germplasm. Screening of genotypes under naturally prevailing races of rust species is the better and inexpensive approach. In the present study 65 genotypes including five checks (AARI-11, Chakwal- 50, Aas- 11, Morocco and Galaxy-13) were evaluated for adult plant response to wheat rusts and water deficit conditions. Experimental material was planted in four blocks each having new entries along with repetition of five checks in augmented design. Data was recorded on morphological traits including plant height, peduncle length, spike length, productive tillers per meter, flag leaf area, number of spikelet per spike, grains per spike, single head weight, 1000 grain weight, days to maturity and grain yield per acre. Significant variation was observed among genotypes for all the studied traits. On the basis of performance G39 and G36 were better than commercial drought check Chakwal-50 in almost all the traits. However rust screening under natural rust infestation revealed that although Morocco showed susceptible (S) response yet only six genotypes were susceptible to yellow rust whereas all others were resistant. In case of leaf rust 29 were completely resistance, 25 were moderately resistant, seven were moderately susceptible and only four were completely susceptible to currently active races of leaf rust. However, in the case of stem rust, 61 genotypes showed complete resistance to stem rust, two showed moderately resistance and two were moderately susceptible. Information obtained from this study would be favorable for breeding rust resistant and drought tolerant cultivars.
Rusts are one of major threats to reduce wheat production and productivity in Nepal. Rust fungi are obligate parasite survival during off-season either on voluntary wheat plants or other grass or timber plant species is not yet confirmed in Nepal. High-inputs, suitable hosts and existence of warm humid and cool high lands in different parts of country promote carryover of inoculums of rust fungi. Nepal could be potential sources of yellow rust and leaf rust epidemic for itself and for Indian sub-continent. Surveillance is one of important steps to know status of wheat diseases especially rusts occurrence in country. The SAARC rust tool box is systematic and regular monitoring activity of wheat and barley diseases conducted at various locations in Nepal. Altogether, 183 and 180 locations were surveyed in different parts of Nepal were put in global rust tool box server and validated in fiscal years 2014/15 and 2015/16. Wheat rusts disease scenario has been observed differently, it could be due to climate change and different virulent spectrum of races/pathotypes of rusts fungi and deployment of different wheat varieties. Yellow rust was widely occurred throughout mid hills in Nepal. Higher severity of yellow rust was observed in Kathmandu valley (80S -100S). Leaf rust was moderate to high (10MS-100S) in plain and hills. There was higher score of leaf rust observed in plain as well as in mid hills on susceptible wheat cultivar. Regular monitoring and surveillance at different locations in Nepal has been found helpful in digging out actual problems of wheat crop. Monitoring races of all three rusts occurring in Nepal is necessary for successful planning to manage rusts by deploying effective genes. Rust tool box is important to keep vigilance of new emerging rust races in country. This in turn could increase production and productivity of wheat in Nepal.
Stripe rust and leaf rust are two most widely distributed diseases of wheat despite the fact that major emphasis has been made globally to develop rust resistant varieties. The wild tetraploid wheat Triticum araraticum (AAGG) evolved in the eastern part of Fertile Crescent is a source of useful traits for the improvement of wheat including resistance to disease. T. araraticum acc. pau4692 and a derived advanced backcross introgression line (IL) in susceptible T. durum cv. Malvi local background showed high level of seedling resistance against Indian pathotypes of leaf rust and stripe rust. The F5 Single seed descent (SSD) population developed from the crosses between T. araraticum IL with T. durum cultivar PBW114 was screened with commonly prevalent pathotypes of leaf rust and stripe rust in India at the seedling stage. The genetic analysis indicated that the leaf rust resistance is conditioned by two genes and stripe rust resistance by a single gene. The SSR markers mapped on A and B genome were used for parental polymorphism along with resistant and susceptible bulks for leaf rust and polymorphic markers between bulks were used on the whole population. The molecular marker data using single marker analysis showed that leaf rust resistance genes were mapped on chromosome 2A and 7A linked to SSR markers Xwmc149 and Xbarc49, respectively. The genes have been temporarily named as LrAr1 and LrAr2. Bulked segregant analysis (BSA) for mapping stripe rust resistance is in progress.
Wheat plays a vital role in multifaceted farming system of Pakistan. Like other many other countries, Pakistan's sustainable wheat production is also continuously threatened by a number of biotic and abiotic stresses. Among the biotic stresses, three rust diseases of wheat have been the most devastating. Stem rust was effectively controlled with adoption of the semi-dwarf spring wheats of the Green Revolution. However, the threat of the evolution of Ug99 race of stem rust in East Africa and its migration to Iran cannot be neglected. The Chance of of Ug99 migrating from Iran into Pakistan, coupled with the presence of dangerous new races of stripe and leaf rusts invites enormous efforts for development of rust resistant varieties for sustainable production of the wheat in the country. In this regard the Wheat Program, NARC, Pakistan initiated an intensive breeding program with financial and technical support of USDA and CIMMYT. Diverse sources of resistance to the three rusts particularly to the stem rust race Ug99 were introduced from CIMMYT. Through the rigorous selection procedure, four rusts resistant wheat varieties (NARC 2011, Pakistan 2013, Zincol 2016 and Borlaug 2016) have been released. These varieties are also resistant to Ug99. The varieties i.e. NARC 2011, Borlaug 2016 and Zincol 2016 are performing well in irrigated areas whereas Pakistan 2013 is suitable for rainfed conditions. The variety Zincol 2016 has high Zn content (35 ppm) in grain as compared to national standard check variety (25 ppm). These varieties are not only higher yielding but also possess good grain quality and other desirable traits. A considerable quantity of seed of the varieties is already present in the national seed system and will reduce the risk of Ug99 threat.
Leaf rust is an important worldwide disease on wheat caused by the fungus Puccinia triticina. Great infections on durum wheat occurred in Southern Spain in the 2000s but diminished in recent years due to deployment of resistant varieties and application of fungicides by farmers. A leaf rust survey was carried out from the 2009-15 period to monitor the virulence spectrum of the prevailing pathotypes. A total of 84 leaf rust isolates were collected on durum wheat fields. From those, single culture were obtained and used to inoculate a set of 27 differential isolines of the susceptible variety Thatcher. In addition 8 durum varieties with known Lr genes were also included.
The main highlight is that the resistance conferred by the popular Lr14a gene was broke up in 2013, but since then virulence to this gene is not widespread. In total, 23% of the isolates were virulent to the lines containing Lr14a. Lr1, Lr3, Lr3bg, Lr16, Lr24, Lr26, and Lr28 are very effective. Lines carrying Lr2c, Lr10, Lr14b, Lr20, Lr23, and LrB displayed susceptibility to most isolates. The durum varieties Jupare (Lr27+Lr31), Guayacan (Lr61), Storlom (Lr3+) and Camayo (LrCam) are also resistant against all isolates tested. Diversification of Lr genes is needed in the coming varieties to delay the appearance of new virulent races.