All BGRI Abstracts

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Breeding for climate smart bread wheat varieties

BGRI 2018 Poster Abstract
Amna Kanwal Wheat Research Institute, Ayub Agricultural Research Institute,Faisalabad,Pakistan
Mehvish,Makhdoom, Javed, Ahmad, Makhdoom, Hussain, Iqra, Ghafoor, , , , , , , , , , , , , , , , , , , , , ,

Wheat crop is facing immense losses each year owing to climate change, eventually being major threat to global food security. So, the objective of the present study was to screening of advance lines under drought and heat stress conditions. In following study, 30 advance lines of wheat along with four checks(Faislabad-08, Millat-11, Galaxy-13 and ujala16) with three treatments (heat, drought, normal) were tested for different morphological (days to heading, plant height, days to maturity, biomass,1000 grain weight and grain yield) and physiological (canopy temperature at vegetative & reproductive stage, NDVI vegetative & reproductive), parameters. Biplot analysis depicted that V2, V3, V8, V14, V19, V25, and V30 showed the highest OP vector for grain yield in drought environment. Whereas, under heat conditions, V3, V4, V5, V10, V11, and V12 displayed their maximum longest vector for grain yield. Correlation analysis depicted that grain yield had non-significant correlation with canopy temperature (vegetative stage), normalized difference vegetation index (vegetative stage) canopy temperature (reproductive stage), plant height, days to heading and days to maturity under heat stress environment, while it had significant association with biomass and thousand grain weight. Under drought environment, grain yield had positive and significant correlation with biomass while on the other hand it had negative but significant association with normalized difference vegetation index (reproductive stage) and canopy temperature (reproductive stage). Best performing lines could be efficiently exploited in research programs to evade the perilous impact of climate change.

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Emerging private sector involvement in wheat seed research and production in India

BGRI 2018 Poster Abstract
Venugopal Chintada Sathguru Management Consultants
Kanan,Vijayaraghavan, Vijay, Paranjape, Richa, Kapur, Vignesh, Vilayanur Jayaraman, , , , , , , , , , , , , , , , , , , , , ,

Wheat is one of the most important food crops of the world. India is the second largest producer of wheat, currently producing 95 million tons from about 30 million hectares. Looking ahead to 2050, India needs to constantly increase production to about 150 million tons, to meet the rising population and demand. With area under cultivation having no room for growth, productivity will be the main pillar for growing production. Currently India?s yield of 3.1 t/ha has plenty room for growth as compared to the world leaders such as France (7.5 t/ha), Germany (7.3 t/ha) and UK (6.6 t/ha). Wheat productivity depends on multiple factors, seed being one of the most important.
The current operating environment is characterized by wheat R&D in the country conducted by public institutes, but there are clear signs of an emerging private sector involvement. The government promoting Inter-institutional linkages by way of associating private players in research and seed production.
This study evaluates and reflects on the current situation of the wheat seed sector in India - from research, variety/hybrid development, seed production, indent to distribution, the players involved, the challenges therein, upcoming technologies and the way forward.

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Mapping of all-stage leaf rust resistance genes in Triticum dicoccoides derived recombinant inbred line (RIL)

BGRI 2018 Poster Abstract
Ahmed Elkot School of Agricultural Biotechnology, Punjab Agricultural University, Ludhiana-141004 India
Rohtas,Singh, Satinder, Kaur, Parveen, Chhuneja, , , , , , , , , , , , , , , , , , , , , , , ,

Leaf rust caused by Puccinia triticina is one of the most historical and economically important wheat diseases. Breeding for new cultivars with effective gene combinations is the most promising approach for reducing losses due to leaf rust. Wild emmer wheat, Triticum dicoccoides, the progenitor of modern tetraploid and hexaploid wheats, is an important resource for new variability for disease resistance genes. An accession of T. dicoccoides acc. pau4656 showed resistance against prevailing leaf rust races in India, when tested at the seedling and adult plant stage. The introgression line, developed from the cross of the leaf rust resistant T. dicoccoides acc. pau4656 and the susceptible T. durum cultivar Bijaga yellow, was crossed with T. durum cultivar PBW114 to generate recombinant inbred lines (RIL) for mapping leaf rust resistance gene(s). RIL population was screened against highly virulent leaf rust race 77-5 at seedling stage and inheritance analyses revealed the segregation of two leaf rust resistance genes. The genes have been temporarily designated as LrD1 and LrD2. A set of 387 SSR marker was used for bulked segregant analysis (BSA). The markers showing diagnostic polymorphism in the resistant and susceptible bulks were amplified on whole of the population. Single marker analysis using MapDisto software placed LrD1 on the long arm of chromosome 6A linked to the SSR marker Xwmc256 and LrD2 on long arm of chromosome 2A close to the SSR marker Xwmc632. T. durum cv. PBW114 used in the present study was also resistant to leaf rust at the seedling stage. So one of these leaf rust resistance genes might have been contributed by the PBW114 and other by T. dicoccoides. The current study identified valuable leaf rust resistance genes for deployment in wheat breeding programme.

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Genetic analysis and location of resistance genes to wheat stripe rust in Chinese landrace Sifangmai

BGRI 2018 Poster Abstract
Jianlu Sun Institute of Plant Protection, Chinese Academy of Agricultural Sciences
Jing,Feng, Ruiming, Lin, Fengtao, Wang, Qiang, Yao, Qingyun, Guo, Shichang, Xu, , , , , , , , , , , , , , , , , ,

Wheat stripe rust is an important air borne disease caused by Puccinia striiformis f. sp. tritici, and seriously threatens the safety of wheat production. Breeding and utilization of resistant varieties is the most economical, safe and effective measure to control wheat stripe rust. Sifangmai is a landrace from the state of Guangxi, China, and maintains good resistance to the current epidemic species CYR34, CYR33, CYR32 and CYR29 in China. Sifangmai was crossed with Taichung 29 to obtain F1, F2 and F2:3 to analyze its character of inheritance. In the adult stage, the cross of Sifangmai /Taichung 29 was inoculated by CYR32. The genetic analysis showed that the resistance of Sifangmai to CYR32 was controlled by a dominant gene, named as YrSF. A mapping population of F2 was genotyped with simple sequence repeat (SSR) markers. SSR loci Xgpw8015, Xgpw4098, Xwmc73, Xgpw8092, Xgpw7309 and Xbarc89 on 5B chromosome showed polymorphic between Taichung 29, Sifangmai, and resistant and susceptible pools, indicating that the resistant gene in Sifangmai was located on the 5B chromosome. The linkage map of these SSR markers was constructed and the nearest SSR to the gene is Xgpw8015. A set of Chinese Spring nulli-tetrasomic lines was used to confirm YrSF on chromosome 5B. YrSF is different from known genes in chromosome 5B. Xgpw8015 can be used as a marker for detection of YrSF.

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Investigation on heat stress tolerance in bread wheat (Triticum aestivum. L) for the conditions of terminal heat stress.

BGRI 2018 Poster Abstract
Juned Bagwan Agharkar Research Institute Pune
yashavantha kumar,Kakanur, Shrikanth, Khairnar, Balgounda, Honrao, Vijendra, Baviskar, Ajit, Chavan, Vitthal, Gite, Deepak, Bankar, Sameer, Raskar, Satish chandra, Misra, , , , , , , , , , , ,

Heat stress globally remains the most important factor determining yield anomalies. Terminal heat stress shortens the duration of grain filling. Hence, this investigation was undertaken during the cropping season 2016-17 to evaluate heat stress tolerance of 32 bread wheat genotypes planted in timely (optimal temperature) and late (terminal heat stress) sown condition at Agharkar Research Institute, Pune. Data were collected and analyzed for various agronomical and physiological traits and also selection indices for stress tolerance, derived from grain yield of wheat genotypes under optimal and late sowing conditions. It was observed that the genotypes DBW 187, GW 477, HD 2932, DBW 107, PBW 752 were the highest yielding under timely sown condition whereas, HD 3226, DBW 187, HP 1963, HD 3219, DBW 196 were the highest yielding under late sown condition. DBW 187 was found to withstand the stress conditions. Minimum percent yield decrease and high yield stability index (YSI) was found in HD 3219 followed by HD 3226 and DBW 196 which indicated their better performance under stress condition. Harmonic mean, a stress tolerance selection index was found to be the best fit of linear model (R2 = 0.78) and a good indicator of high yield under heat stress condition. Physiological parameters, Chlorophyll (SPAD), canopy temperature (Infra-red thermometer) and vegetation index (NDVI) have not shown significant relation with yield, however, they were found to be significantly associated with yield contributing traits like biomass, thousand grain weight, grain number per spike. DBW 187 and HP 1963 showed stable yields with high PCA 1 and low PCA 2, indicating their resilience to stress conditions. The investigation has resulted in identification of genotypes for terminal heat stress conditions and also given greater insights in understanding the importance of physiological traits and stress tolerance indices in selection process.

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Puccinia striiformis population structure in Nepal and Bhutan in comparison with Himalayan population from Pakistan

BGRI 2018 Poster Abstract
Sidra Nazir The University of Agriculture, Peshawar, Pakistan
Muhammad,Khan, Sangay, Tshewang, Sarala, Lohani, David, Hodson, Muhammad, Imtiaz, Sajid, Ali, , , , , , , , , , , , , , , , , ,

The Himalayan region of Pakistan and China has been shown to be the centre of diversity of Puccinia striiformis, however, little is known about the Eastern part of the Himalayas. We studied the genetic structure of P. striiformis from Nepal and Bhutan in comparison with Pakistan through microsatellite genotyping of 66 isolates from Nepal (35 isolates) and Bhutan (31 isolates) collected during 2015 and 2016. Genetic analyses revealed a recombinant and highly diverse population structure in Bhutan and Nepal. A high level of genotypic diversity was observed for both Bhutan (0.92) and Nepal (0.67) with the detection of 53 distinct multilocus genotypes (MLGs) in the overall population; 28 for Bhutan and 27 for Nepal. Mean number of alleles per locus was higher in Bhutan (3.33) than Nepal (3.11), while the gene diversity was higher in Nepal (0.4279) than Bhutan (0.3552). A non-significant difference between the observed and the expected heterozygosity in both populations further confirmed the recombinant structure. Analyses of population subdivision revealed a low divergence between Nepal and Bhutan (FST=0.1009), along with the detection of certain common MLGs in both populations. The overall population was clearly divided into six genetic groups, with no geographical structure, confirmed by the distribution of multilocus genotypes over two countries, suggesting a potential role of migration. Comparison with the Pakistani P. striiformis population suggested a high genotypic diversity in Nepal (0.933) and Bhutan (0.959), though lower than the previously reported from Himalayan region of Pakistan (Mansehra; 0.997). The overall high diversity and recombination signature suggested the potential role of recombination in the eastern Himalayan region (Nepal and Bhutan), which needs to be considered during host resistance deployment and in the context of aerial dispersal of the pathogen.

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Evaluation of naked barley landraces from mountainous region of Nepal for yellow rust resistance.

BGRI 2018 Poster Abstract
Ajaya Karkee Nepal Agricultural Research Council, National Agriculture Genetic Resources Centre, Khumaltar, Lalitpur
Baidhya Nath,Mahto, Mina Nath, Paudel, Dhruba Bahadur, Thapa, Krishnahari, Ghimire, Bal Krishna, Joshi, Suraj, Baidya, Prem Bahadur, Magar, , , , , , , , , , , , , , , ,

Naked barley (Hordeum vulgare var. nudum L.), is an important winter crop grown in the mountain region of Nepal. Stripe rust (Puccinia striiformis f.sp. hordei), is the most destructive fungal disease of barley in the hills of Nepal with losses up to 100 %, occurring in cooler regions with higher altitude (1000-2500 m). Yield components along with final rust severity (FRS), area under disease progress curve (AUDPC) and average coefficient of infection (ACI) were evaluated for 20 indigenous barley accessions collected from mountainous region of Nepal at National Agriculture Genetic Resource Centre (Genebank), Khumaltar, Nepal during winter season of 2016-2017 with three replications. Barley cultivars displayed a range of severity from 0% to 100% with immune to susceptible reaction. AUDPC values were significantly different among the tested genotypes. Barley genotypes with accession number NGRC00837 (ACI-3), NGRC02357 (ACI-7), NGRC06026 (ACI-9) and NGRC02306 (ACI-12) were found resistant with lowest diseases progress while NGRC02350 (ACI-60), NGRC06036 (ACI-80), NGRC02312 (ACI-86), NGRC04003 (ACI-83) and NGRC02318 (ACI-93) were found as highly susceptible landraces. Correlation coefficients of agronomical parameters such as grains per spike and 1000-kernels weight with epidemiological parameters such as AUDPC and ACI were found highly significant. Resistant genotypes with low values for disease progress as well as diseases reaction were identified. The results indicate that source of resistance to yellow rust in naked barley genotypes are available in Nepal and can be used for resistant breeding in future.

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Reaction of Bhutanese wheat cultivars and differential lines to rust diseases at mid and low altitudes in Bhutan

BGRI 2018 Poster Abstract
Sangay Chophel National Plant Protection Center
Thinlay (PhD),, Ugyen, Yangchen, , , , , , , , , , , , , , , , , , , , , , , , , ,

Wheat rusts are the important fungal diseases that limit the production and downgrade wheat quality. There are three types of wheat rusts; stem rust caused by Puccinia graminis f. sp. tritici, stripe rust caused by Puccinia striiformis f. sp. tritici and leaf rust caused by Puccinia triticina. The study was conducted to assess the susceptibility of Bhutanese wheat cultivars and differential lines to rust diseases at mid and low altitudes. The study was conducted in Mendagang for mid altitude (1,332 masl) and Samtenling for low altitude (378 masl) from December 2016 to March 2017. The experiment followed Randomized Complete Block design (RCBD) with 15 treatments (wheat lines) and three replications. However, only 11 lines germinated in both locations. Disease assessments were performed approximately at 60, 90 and 120 days after sowing following the modified Cobb?s disease rating scale. Only leaf rust was observed and the disease incidence ranged from 2.5 to 10% and 2.5 to 16% at mid and low altitudes respectively. Disease severity of 5 to 20%, corresponding to field response of immune to moderately resistant was observed at mid altitude; while 5 to 100% with immune to susceptible field response was observed at low altitude. There was a significant difference in disease incidence by site (p=.038) but not in disease severity (p=.129). The study also revealed that disease severity was positively correlated (r=.359); (r=.034); with mean minimum and maximum temperature respectively and (r=.361) with mean minimum relative humidity. All the correlations were highly significant (p=.003). The study found that ICARDA line 1 with severity (100%) was highly susceptible (100S) to leaf rust at low altitude while Bajosokha kaa remain an immune in both the locations. The results indicate that leaf rust can occur in both low and mid altitudes; however selection of suitable lines requires more extensive studies.

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Sources of Resistance to Septoria Tritici Blotch Identified in Ethiopian Durum Wheat

BGRI 2018 Poster Abstract
Carlo Fadda Bioversity International
Bogale,Nigir, Cherinet, Alem, Yosef G., Kidane, Mario Enrico, P?, Matteo, Dell'Acqua, , , , , , , , , , , , , , , , , , , ,

Septoria tritici blotch (STB) is a devastating fungal disease affecting durum and bread wheat cultivation worldwide. The search for resistance sources in untapped genetic resources may speed up breeding for STB resistance. Ethiopian durum wheat landraces represent a valuable source of allelic diversity for several traits, including disease resistance. In this study, we measure STB phenotypes under natural infection on two interconnected populations: i) a diversity panel comprising 318 Ethiopian durum wheat lines, mostly farmer varieties, and ii) a nested association mapping (NAM) population developed from a subset of the diversity panel. Phenology, yield and yield component traits were concurrently measured in the populations. We evaluated the distribution of STB resistance in Ethiopian genetic materials and the relationship existing between STB resistance and agronomic traits. STB resistance sources were found in landraces as well as in NAM lines. The genetic material was genotyped with more than 13 thousand genome-wide SNP markers to describe the linkage disequilibrium and genetic structure existing within the panels. The genotyping information was combined with phenotypes to identify marker-trait associations and loci involved in STB resistance. We identified several loci, each explaining up to 10% of the phenotypic variance for disease resistance. We developed KASP markers tagging the most interesting loci to allow the uptake of our results in a breeding perspective. Our results showed that the Ethiopian untapped allelic diversity bears a great value for studying the molecular basis of STB resistance and for breeding for resistance in local and international material.

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Evolution of durum wheat from Moroccan landraces to improved varieties

BGRI 2018 Poster Abstract
Mona Taghouti INRA
Fatima,Gaboun, Nasserlhaq, Nsarellah, Keltoum, Rhrib, Atmane, Rochdi, , , , , , , , , , , , , , , , , , , , , ,

Durum wheat landraces have constituted the main source of Moroccan wheat production until the first half of the last century. This local germplasm is still cultivated in less favorable environments particularly in mountains and sub-Saharan regions. In recent decades of the late 20th and early 21th centuries, the genetic improvement had led to the release of new durum wheat cultivars highly uniform and more productive.
The present paper investigates the evolution of genetic variability in terms of productivity and quality related traits using an historical series of Moroccan durum wheat genotypes grouped according to their period of release into "Landraces/ Old cultivars," "Intermediate cultivars," and "Modern cultivars". A significant improvement was achieved in durum wheat Morroccan productivity. Modern cultivars exceed their predecessors in terms of productivity related traits. The genetic gain was clearly associated with a reduction in plant cycle and plant height lowering the straw yield which resulted in an increase of grain yield estimated to 15.42Kg/ha/year. However, results revealed a reduction in terms of almost all quality related traits; -0.12% per year for protein content, -0.30 % per year for gluten strength, -0.31% per year for yellow pigment content, and -0.19% per year for vitreousness. The results underline the important variability in grain quality attributes among landraces genotypes. This local germplasm may be used as sources of quality-improving attributes in durum wheat breeding program to develop new varieties combining both high productivity and grain quality.

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